dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05685
Location and strand information: 17733 - 19538 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05686
Location and strand information: 19516 - 21015 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05687
Location and strand information: 21146 - 22246 (-)
Family: GH5_13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9875
Protein molecular weight: 43261.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05688
Location and strand information: 22308 - 23144 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05689
Location and strand information: 23141 - 24013 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05690
Location and strand information: 24089 - 25450 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05691
Location and strand information: 25651 - 27213 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05692
Location and strand information: 27206 - 28933 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05693
Location and strand information: 29280 - 30710 (-)
Family: null
Protein type: null
Protein description: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05694
Location and strand information: 30715 - 31335 (-)
Family: null
Protein type: null
Protein description: Glutamyl-tRNA(Gln) amidotransferase subunit A

Gene clsuter ID: MGYG000002330_174|CGC1
Gene ID: MGYG000002330_05695
Location and strand information: 31341 - 32234 (-)
Family: 3.A.9.1.1
Protein type: TC
Protein description: Glutamyl-tRNA(Gln) amidotransferase subunit A

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002330_05685	hypothetical protein	TC	17733	19538	+	8.A.59.2.1
MGYG000002330_05686	Regulator of RpoS	TF	19516	21015	+	HTH_AraC+HTH_AraC
MGYG000002330_05687	hypothetical protein	CAZyme	21146	22246	-	GH5_13
MGYG000002330_05688	L-arabinose transport system permease protein AraQ	TC	22308	23144	-	3.A.1.1.28
MGYG000002330_05689	L-arabinose transport system permease protein AraP	TC	23141	24013	-	3.A.1.1.20
MGYG000002330_05690	hypothetical protein	STP	24089	25450	-	SBP_bac_1
MGYG000002330_05691	Chemotaxis response regulator protein-glutamate methylesterase	TF	25651	27213	-	HTH_AraC+HTH_AraC
MGYG000002330_05692	hypothetical protein	TC	27206	28933	-	8.A.59.2.1
MGYG000002330_05693	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	null	29280	30710	-	GatB_N\| GatB_Yqey
MGYG000002330_05694	Glutamyl-tRNA(Gln) amidotransferase subunit A	null	30715	31335	-	Amidase
MGYG000002330_05695	Glutamyl-tRNA(Gln) amidotransferase subunit A	TC	31341	32234	-	3.A.9.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature